Biochemical and Molecular identification of bacteria Streptomyces fradiae in Iraq

Authors

  • Tabarak Mohammed khalid
  • Mohsen Hashim Risan

DOI:

https://doi.org/10.52783/jns.v14.1843

Keywords:

Biochemical, Molecular, bacteria, Streptomyces fradiae

Abstract

Background: Streptomyces Waksman & Henrici 1943 is the type genus of the family Streptomycetaceae, it is a group of bacteria that are classified as aerobic, Gram-positive, and filamentous. These bacteria are capable of producing well-developed vegetative hyphae that include branches.

Methods: The period of time from December 2023 to January 2024 saw the collection of fifty soil samples. Several locations inside the city of Baghdad were chosen for the collection of samples. After sample dilution it put on ISP2 agar for Streptomyces isolation. Several biochemical tests were done for the isolates.

Results: Thirty Streptomyces isolate were obtained depended on morphological, cultural and biochemical characteristic. The colonies under suspicion were cultivated on ISP2 agar and chosen based on their color (gray, creamy, or white) and colony diameter (ranging from 1 to 10 mm). Additionally, their morphology was considered, with the colonies initially having a smooth surface and later becoming powdery, soft, and granular as they formed aerial mycelium. The isolates were positive to catalase, Citrate Utilization, Sugar utilization, Nitrate reduction, Casein hydrolysis and starch hydrolysis biochemical tests, Whole genome DNA from overnight cultures of isolates of Streptomyces fradiae were extracted. 

Conclusion Streptomyces identification is a complex procedure. Classification within the Streptomycetaceae family relies heavily on morphological and biochemical characteristics. The local Streptomyces spp. is classified as belonging to the genus Streptomyces based on morphological, cultural, and biochemical trait and genomic DNA analysis.

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References

Al-Rubaye, T. S., Risan, M. H., Al-Rubaye, D., & Radi, R. O. Characterization of marine Streptomyces spp. bacterial isolates from Tigris river sediments in Baghdad city with Lc-ms and 1 HNMR. Journal of Pharmacognosy and Phytochemistry, 2018a. ; 7(5), 2053-2060.

Al-Rubaye T, Risan M. H, Al-Rubaye D and Radi OR Identification and In vitro antimicrobial activities of Marine Streptomyces spp. Bacteria from Tigris River Sediments in Baghdad City. World Journal of Pharmaceutical and Life Sciences. 2018b;10: 120-134

Qasim B, Risan M H. (2017). Antitumor and Antimicrobial Activity of Antibiotic Produced by Streptomyces spp. World Journal of Pharmaceutical Research, 6(4): 116-128.

Amin, S. M., Rasin, M. H., & Abdulmohimin, N. Antimicrobial and Antioxidant Activities of Biologically Active Extract from Locally Isolated Actinomycetes in Garmian Area. Journal of Garmian University, 2016; 1(10). 625-639.

Yun T, Zhang M, Zhou D, Jing T, Zang X, Qi D, Chen Y, Li K, Zhao Y, Tang W. (2021). Anti-Foc RT4 Activity of a Newly Isolated Streptomyces sp. 5–10 From a Medicinal Plant (Curculigo capitulata). Frontiers in Microbiology, 11: 3544. https://doi.org/10.3389/fmicb.2020.6 10698

Mahon C R, Lehman D C, Manuselis G. (2018). Textbook of diagnostic microbiology-e-book: Elsevier Health Sciences. 1088 pages,

Davenport R J, Curtis T P, Goodfellow M, Stainsby F M, Bingley M. (2000). Quantitative use of fluorescent in situ hybridization to examine relationships between mycolic acid-containing actinomycetes and foaming in activated sludge plants. Applied and environmental Microbiology, 66(3): 1158-1166. https://doi.org/10.1128/AEM.66.3.11 58-1166.2000

Das S, Lyla P, Khan S A. (2008). Distribution and generic composition of culturable marine actinomycetes from the sediments of Indian continental slope of Bay of Bengal. Chinese Journal of Oceanology and Limnology, 26(2): 166-177. https://doi.org/10.1007/s00343-008- 0166-5

Tindall, B.J.; Rossello-Mora, R.; Busse, H.J.; Ludwig, W.; Kampfer, P. Notes on the characterization of prokaryote strains for taxonomic purposes. Int. J. Syst. Evol. Microbiol. 2010, 60, 249–266.

Parungao M M; Arungao MM; Maceda E. Bon G.& Villano M A F. Screening of Antibiotic-Producing Actinomycetes Screening of Antibiotic-Producing Actinomycetes from Marine, Brackish and T from Marine, Brackish and Terrestrial Sediments errestrial Sediments of Samal Island, Philippines of Samal Island, Philippines. JRSCE.2007; 4 (3): 29-38.

Risan, M. H.; Bassam, Q.; Ban, A. A. and Athraa, H. M. Identification active compounds of BACTERIA Streptomyces using High-Performance Liquid Chromotography. Wjpls.2017;3 (6): 91-97.

Antido, J. W. A., and Climacosa, F. M. M. (2022). Enhanced Isolation of Streptomyces from Different Soil Habitats in Calamba City, Laguna, Philippines using a Modified Integrated Approach. International journal of microbiology, 2022, 2598963. https://doi.org/10.1155/2022/2598963

Rajeb ES, Hassan ZY, Risan M. H. Extraction and purification of fredericamycin A, B from Streptomyces griseus. Ann Rom Soc Cell Biol 2021;25:16971-8. 13.

Azad, S. M., Jin, Y., Ser, H. L., Goh, B. H., Lee, L. H., Thawai, C., & He, Y. W. Biological insights into the piericidin family of microbial metabolites. Journal of applied microbiology,2022; 132(2): 772-784.‏

Risan M. H, Amin SM, Abdulmohimin N. Production, Partial Purification and Antitumor Properties of Bioactive Compounds from Locally Isolated Actinomycetes (KH14), Iraqi Journal of Biotechnology. 2017; 15(3): 51- 64.

Maiti, P.K., Das, S., Sahoo, P. et al. Streptomyces sp SM01 isolated from Indian soil produces a novel antibiotic picolinamycin effective against multi drug resistant bacterial strains. Sci Rep 10, 10092 (2020). https://doi.org/10.1038/s41598-020-66984-w

Li, Q., Chen, X., Jiang, Y. and Jiang, C., (2016). Morphological identification of actinobacteria. Actinobacteria-basics and biotechnological applications, pp.59-86.

Rajeb ES, Risan M. H, Hassan ZY. Effect of purified bioactive compounds for Streptomyces griseus on proliferation lymphocytes in vitro. Indian J Ecol 2021;48:1858-62.

Risan M. H, Taemor SH, Muhsin AH, Saja M Hafied, Sarah H Ghayyib, Zahraa H Neama. Activity of Lactobacillus acidophilus, L. Planetarium, Streptomyces and Saccharomyces cerevisiae with extracts of date palm and dried shell of pomegranate to reduce aflatoxin M1 in Iraq, World Journal of Pharmaceutical and life sciences. 2018; 4(6): 119-13.

Risan M. H, Qasim B, Abdel-jabbar B, Muhsin AH. Identification Active Compounds of Bacteria Streptomyces Using High-Performance Liquid Chromatography, World Journal of Pharmaceutical and Life Sciences. 2017; 3(6): 91- 97.

Qasim B, Risan MH. Anti-tumor and Antimicrobial Activity of Antibiotic Produced by Streptomyces spp, World Journal of Pharmaceutical Research. 2017; 6(4): 116-128. [20]

Risan M.H, Rusul J, Subhi SA. Isolation, characterization and antibacterial activity of a Rare Actinomycete: Saccharopolyspora sp. In Iraq. East African Scholars Journal of Biotechnology and Genetics. 2019; 1(4): 60-

Risan, M. H., Subhi, S. A., and Hussain, B. . Y. (2022). Evaluating the Inhibitory Effect of Streptomyces Bacteria against Pathogenic Bacteria and Study its Compatibility with Some Antibiotic Types. Biomedicine and Chemical Sciences, 1(2), 35–40. https://doi.org/10.48112/bcs.v1i2.75

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Published

2025-02-27

How to Cite

1.
Mohammed khalid T, Hashim Risan M. Biochemical and Molecular identification of bacteria Streptomyces fradiae in Iraq. J Neonatal Surg [Internet]. 2025Feb.27 [cited 2025Oct.24];14(4S):589-96. Available from: https://www.jneonatalsurg.com/index.php/jns/article/view/1843