To Study the Emergence of Mcr-1 Gene In Carbapenemase Encoding Colistin Resistance Klebsiella Pneumoniae in Clinical Isolates at a Tertiary Care Centre
Keywords:
K. Pneumonia, Colistin resistance, MCR-1 gene, CLSI, Carbapenem resistance.Abstract
Background: Colistin resistant K. pneumoniae has rapidly become one of the leading cause of nosocomial infection, community acquired infection and is major ongoing problem in the health care facilities globally, including India. Despite the critical importance of colistin as a last-resort antibiotic, limited studies have investigated colistin resistance in human infections. To bolster the number of so called “last resort” antimicrobial agents, polymyxins such as colistin are once again being administered clinically due to their potential effectiveness against MDR infections.
Aim and Objective: To study the prevalence of MCR-1 gene and carbapenemase encoding genes among colistin-resistance Klebsiella pneumoniae in clinical isolates.
Material and Methods: A total of 200 K. Pneumonia isolates were cultured and they were confirmed using the VITEK 2 system. The DNA was extracted using the Qiagen DNA extraction kit and the PCR was performed to detect the MCR-1 gene and Carbapenemase gene and the antibiotic susceptibilities, extended-spectrum beta-lactamase (ESβL), multidrug-re sistant (MDR), and CR-KP were determined by using the VITEK 2 system, disc diffusion, and the minimum inhibitory concentration (MIC) test according to the CLSI guidelines 2024.
Result: In the present study out of 200 K. pneumoniae isolates it was noted that males were 111(55.5%) and females were 89 (44.5%) stating males were more in number, out of which carbapenem resistant K.pneumoniae were 50 (25%) in which males were 30(60%) and females were 20 (40%) and the colistin resistance percentage was 12.5 % (25/200).Shows the total number of isolates collected from samples in which urine (69%), blood(14%), pus (6.5%), sputum(5%), wounds(3.5%), tissue (1%), CSF (1%).In the present study the rates of ESβL, MDR, and CR-KP were observed to be 25%, 25% and 100%, respectively. It was noted that only one MCR-1 gene was expressed out of the 50 colistin resistance isolates was detected.
Conclusion: The emergence of plasmid-mediated colistin resistance due to the mcr-1 gene poses a great threat to human health by causing the ineffectiveness of the last-resort antibiotic, polymyxins.
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Denton M. Enterobacteriaceae. Int J Antimicrob Agents. 2007 May;29 Suppl 3:S9- S22. doi: 10.1016/S0924-8579(07)72174-X. Erratum in: Int J Antimicrob Agents. 2007 Dec;30(6):568.
Bush K, Jacoby GA. MINIREVIEW Updated Functional Classification of β- Lactamases, Vol. 54; 2010, p. 969–76.
Queenan AM, Bush K, Queenan AM, Bush K. Carbapenemases: the Versatile β Carbapenemases: the Versatile β-Lactamases; 2007, 20.
Diene1 SM, Rolain1 JM. Carbapenemase genes and genetic platforms in Gram- negative bacilli. Enterobacteriaceae 2014.
Landman D, Georgescu C, Martin DA, Quale J. Polymyxins revisited. Clin Microbiol Rev 2008;21:449–65
Liu YY, Wang Y, Walsh TR, Yi LX, Zhang R, Spencer J, Doi Y, Tian G, Dong B, Huang X, Yu LF, Gu D, Ren H, Chen X, Lv L, He D, Zhou H, Liang Z, Liu JH, Shen J (2016) Emergence of plasmid-mediated colistin resistance mechanism mcr-1 in animals and human beings in China: a microbiological and molecular biological study. Lancet Infect Dis 16: 161–168.
Richter SE, Miller L, Uslan DZ, Bell D, Watson K, Humphries R, McKinnell JA (2018). Risk factors for colistin resistance among Gram-negative rods and Klebsiella pneumoniae isolates. J Clin Microbiol 56: 9.
Azam M, Gaind R, Yadav G, Sharma A, Upmanyu K, Jain M, et al. Colistin re sistance among multiple sequence types of Klebsiella pneumoniae is associated with diverse resistance mechanisms: a report from India. Front Microbiol 2021:12.
from Iran; 2018, p. 1–8. 〈https://doi.org/10.1089/mdr.2017.0404〉. [28] Vasaikar S, Obi L, Morobe I, Bisi-Johnson M. Molecular characteristics and an tibiotic resistance profiles of klebsiella isolates in Mthatha, Eastern Cape Province, South Africa. Int J Microbiol 2017:2017.
Effah CY, Sun T, Liu S, Wu Y. Klebsiella pneumoniae: an increasing threat to public health. Ann Clin Microbiol Antimicrob 2020;19:1–9.
Elmonir W, Abd El-aziz NK, Tartor YH, Moustafa SM. Emergence of colistin and carbapenem resistance in extended-spectrum β-lactamase producing Klebsiella pneumoniae isolated from chickens and humans in Egypt. Biology 2021;10(5):373.
Sanganyado E, Gwenzi W. Antibiotic resistance in drinking water systems: Occurrence, removal, and human health risks. Sci Total Environ. 2019;669:785-97.
Hala S, Antony CP, Alshehri M, Alsaedi A, Al Thaqafi OA,Al-Ahmadi G, Kaaki M, Alazmi M, Alhaj-Hussein TB, Yasen M, Zowawi MH, Al-Amri A, Pain A (2020) An emerging clone (ST2096) of Klebsiella pneumoniae clonal complex 14 with enhanced virulence causes an outbreak in Saudi Arabia. J Infect Public Health 13: 363–364.
Urooj M, Shoukat M, Imran M, Ansar M, Faryal R (2022) Emergence of hypermucoviscous colistin-resistant high-risk convergent Klebsiella pneumoniae ST-2096 clone from Pakistan. Future Microbiol 17: 989-1000. doi: 10.2217/fmb-2021-0292.
Kumar S, Anwer R, Azzi A (2023) Molecular typing methods& resistance mechanisms of MDR Klebsiella pneumoniae. AIMS Microbiol 9: 112-130.
Erkut Afyoncu et al. Investigation of colistin heteroresistance and the colistin resistance genesmcr-1 to mcr-5 in Escherichia coli and Klebsiella pneumoniae isolates in a tertiary hospital in Turkey. J Infect Dev Ctries 2024; 18(11):1687-1694.
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